| 1234567891011121314151617181920212223242526272829303132333435363738394041424344454647484950515253545556575859606162636465666768697071727374 |
- \chapter{Results and Discussion}
- \begin{tabular}{ |p{2cm}||p{3cm}|p{3,5cm}|p{3,5cm}| }
- \hline
- \multicolumn{4}{|c|}{Compression time in milliseconds} \\
- \hline
- & \acs{GeCo}& Samtools \acs{BAM}& Samtools \acs{CRAM}\\
- \hline
- File 1 & 235005& 3786& 16926\\
- File 2 & 246503& 3784& 17043\\
- File 3 & 20169& 3123& 13999\\
- File 4 & 194081& 3011& 13445\\
- File 5 & 183878& 2862& 12802\\
- File 6 & 173646& 2685& 12015\\
- File 7 & 159999& 2503& 11198\\
- File 8 & 148288& 2286& 10244\\
- File 9 & 12304& 2078& 9210\\
- File 10 & 134937& 2127& 9461\\
- File 11 & 136299& 2132& 9508\\
- File 12 & 134932& 2115& 9456\\
- File 13 & 999022& 1695& 7533\\
- File 14 & 924753& 1592& 7011\\
- File 15 & 852555& 1507& 6598\\
- File 16 & 827651& 1390& 6089\\
- File 17 & 820814& 1306& 5791\\
- File 18 & 798429& 1277& 5603\\
- File 19 & 586058& 960& 4106\\
- File 20 & 645884& 1026& 4507\\
- File 21 & 411984& 721& 3096\\
- \hline
- \end{tabular}
- \begin{tabular}{ |p{3cm}||p{3cm}|p{3cm}|p{3cm}| }
- \hline
- \multicolumn{4}{|c|}{File sizes in bytes} \\
- \hline
- & Source file& \acs{GeCo}& Samtools \acs{CRAM}\\
- \hline
- File 1& 253105752& 46364770& 55769827\\
- File 2& 136027438& 27411806& 32238052\\
- File 3& 137338124& 27408185& 32529673\\
- File 4& 135496623& 27231126& 32166751\\
- File 5& 116270459& 20696778& 23568321\\
- File 6& 108827838& 18676723& 21887811\\
- File 7& 103691101& 16804782& 20493276\\
- File 8& 91844042& 16005173& 19895937\\
- File 9& 84645123& 15877526& 20177456\\
- File 10& 81712897& 16344067& 19310998\\
- File 11& 59594634& 10488207& 14251243\\
- File 12& 246230144& 49938168& 58026123\\
- File 13& 65518294& 13074402& 15510100\\
- File 14& 47488540& 7900773& 9708258\\
- File 15& 51665500& 41117340& 47707954\\
- File 16& 201600541& 39248276& 45564837\\
- File 17& 193384854& 37133480& 43655371\\
- File 18& 184563953& 35355184& 40980906\\
- File 19& 173652802& 31813760& 38417108\\
- File 20& 162001796& 30104816& 34926945\\
- File 21& 147557670& 23932541& 29459829\\
- \hline
- \end{tabular}
- % raw data and charts
- % differences in used algos/ algos in tools
- % optimization approach
- % further research focus
- % (how optimization would be recognizable in testdata)
- % todo ms to minutes and bytes to mb. Those tables move to the appendix
- The two tables above contain rather raw measurement values for the two goals, described in \ref{k5:goals}. The first table shows how long each compression procedure took. Each row contains information about one of the \texttt{Homo\_sapiens.GRCh38.dna.chromosome.}x\texttt{.fa} files. To improve readability, the filename were replaced by \texttt{File}. To determine which file was compressed, simply replace the placeholder with the number following \texttt{File}.\\
- While \acs{GeCo} takes more time to compress, an increase in effectivity, meaning in the reduction of file size, can be recognized.\\
|
